Archival Book Chapters
J. H. Abel, A. Chakrabarty, and F. J. Doyle III. “Controlling Biological Time: Nonlinear Model Predictive Control for Populations of Circadian Oscillators.” in Emerging Applications of Control and Systems Theory, R. Tempo, S. Yurkovich, and P. Misra, Editors, Springer, 2018.
T. Yuraszeck, P. Chang, K. Gayen, E. Kwei, H. Mirsky, and F.J. Doyle III, “Methods for In Silico Biology Model Construction and Analysis”, in System Biology in Drug Discovery and Development, D.L. Young and S. Michelson, Editors, Wiley, 2010.
H. Mirsky, J. Stelling, R. Gunawan, N. Bagheri, S.R. Taylor, E. Kwei, J.E. Shoemaker and F.J. Doyle III, “Automatic Control in Systems Biology”, in Handbook of Automation, S. Nof, Editor, Springer, 2009.
J.E. Shoemaker, P.S. Chang, E.C. Kwei, S.R. Taylor, and F.J. Doyle III, “Robustness and Sensitivity Analyses in Cellular Networks”, in Control Theory and Systems Biology, P. Iglesias, and B.P. Ingalls, Editors, MIT Press, 2009.
S. Hildebrandt, N. Bagheri, R. Gunawan, H. Mirsky, J. Shoemaker, S. Taylor, L. Petzold, and F.J. Doyle III, “Systems Analysis for Systems Biology”, in Systems Biomedicine, E. Liu, and D. Lauffenburger, Editors, Academic Press, 2009.
R.J. de Pontbriand, L.E. Allender, and F.J. Doyle III, “Temporal Regulation and Temporal Cognition: Biological and Psychological Aspects of Time Stress”, in Performance Under Stress, P.A. Hancock and J.L. Szalma, Editors, Ashgate, 2008.
F.J. Doyle III, M.A. Henson, B.A. Ogunnaike, J.S. Schwaber, and I. Rybak, “Neuronal Modeling of the Baroreceptor Reflex with Applications in Process Modeling and Control”, in Neural Networks for Control, D.L. Elliott, Editor, Springer Verlag, pp. 89-130, 1997.
J. Stelling, U. Sauer, F.J. Doyle III, and J. Doyle, “Complexity and Robustness of Cellular Systems”, in System Modeling in Cellular Biology, Z. Szallasi, V.Periwal and J. Stelling, Editors, Elsevier, 2005.
R. Gunawan, K. Gadkar, and F.J. Doyle III, “Methods to Identify Cellular Architecture and Dynamics from Experimental Data”, in System Modeling in Cellular Biology, Z. Szallasi, V.Periwal and J. Stelling, Editors, MIT Press, 2005.
N. Hernjak, F.J. Doyle III, B.A. Ogunnaike, and R.K. Pearson, “Chemical Process Characterization for Control Design”, in Integration of Design and Control, P. Seferlis and M. Georgiadis, Editors, Elsevier, 2004.
F.J. Doyle III and P.A. Wisnewski, “Nonlinear Multi-rate MPC with Large Scale Fundamental Models: Application to a Continuous Pulp Digester”, in Nonlinear Model Predictive Control, F. Allgower and A. Zheng, Editors, Birkhaeuser, 2000.
F.J. Doyle III, “Using the WWW to Teach Process Control in Engineering”, in Teaching with Technology: 50 Professors from 8 Universities Tell Their Stories, D. Brown, Editor, 2000.
F.J. Doyle III, “Computational Issues in the Application of Model-based Control to the Pulp and Paper Industry”, in Fundamental Advances and Innovations in the Pulp and Paper Industry, B.N. Brogdon, Editor, 1999.
F. Allgöwer and F.J. Doyle III, “Approximate I/O-Linearization of Nonlinear Systems”, in Nonlinear Model-based Control, R. Berber, Editor, 1998.
F.J. Doyle III and F. Allgöwer, “Nonlinear Process Control: Which Way to the Promised Land?”, in Chemical Process Control V: Assessment and Future Directions, J. Kantor, C. Garcia, and B. Carnahan, Editors, AIChE Symp. Series No. 316, Volume 93, 1997.
A. Aoyama, F.J. Doyle III and V. Venkatasubramanian, “Fuzzy Neural Network Techniques and their Application for Nonlinear Chemical Process Control”, in Fuzzy Theory Systems Techniques & Applications, C.T. Leondes, Editor, Academic Press, 1997.
F.J. Doyle III and M.A. Henson, “Nonlinear Systems Theory”, in Nonlinear Process Control, M.A. Henson and D.E. Seborg, Editors, Prentice-Hall, 1997.
F.J. Doyle III, A.P. Packard, and M. Morari, “Robust Controller Design for a Nonlinear CSTR”, in Recent Advances in Robust Control, P. Dorato, Editor, IEEE Press, pp. 456-461, 1990.